Sunday, September 22, 2013

BRAF, MEK, PI3K and Melanoma



Pathway analysis has become a significant element in developing therapeutics for various cancers. Melanoma was first attacked using the BRAF V600 mutation as a target and then the MEK change was added. However as is seen in many cancers other mutations then occur making the initial therapeutic no longer functional. The pathways for melanoma are shown below. 


In a recent paper by Villanueva et al the authors have demonstrated that a tri-partite treatment has efficacy in melanoma.
They state:

Although BRAF and MEK inhibitors have proven clinical benefits in melanoma, most patients develop resistance. We report a de novo MEK2- Q60P mutation and BRAF gain in a melanoma from a patient who progressed on the MEK inhibitor trametinib and did not respond to the BRAF inhibitor dabrafenib.

We also identified the same MEK2-Q60P mutation along with BRAF amplification in a xenograft tumor derived from a second melanoma patient resistant to the combination of dabrafenib and trametinib. Melanoma cells chronically exposed to trametinib acquired concurrent MEK2-Q60P mutation and BRAF-V600E amplification, which conferred resistance to MEK and BRAF inhibitors. The resistant cells had sustained MAPK activation and persistent phosphorylation of S6K.

A triple combination of dabrafenib, trametinib, and the PI3K/mTOR inhibitor GSK2126458 led to sustained tumor growth inhibition. Hence, concurrent genetic events that sustain MAPK signaling can underlie resistance to both BRAF and MEK inhibitors, requiring novel therapeutic strategies to overcome it.

This is an excellent example of a triple therapeutic attack on a cancer. The problem is that the malignant cells seem always to change again so in effect one must continually measure the cell and add a new element to the treatment. It would be useful if one better understood the natural evolution, if such an assumption is viable.

The authors conclude:

Combination therapy with BRAF and MEK inhibitors appears to be more effective than single-agent approaches; however, this combination could have limited activity in resistant tumors, particularly in the context of concurrent resistance mechanisms that hyperactivate the MAPK pathway. Our studies suggest that this combination is likely to be more effective if used as first-line therapy before resistance emerges. Moreover, effective therapies are sorely needed for patients who progress on BRAF/MEK inhibitors.

Targeting the MAPK pathway downstream of MEK at the level of ERK, S6K, or RSK is a potential approach to overcome resistance. We have demonstrated that a triple combination strategy using BRAF, MEK, and PI3K/mTOR inhibitors led to sustained tumor growth control, with no overt signs of toxicity. This type of strategy will need to be further refined and evaluated. Various issues that could be explored include alternative dose scheduling, drug sequencing, drug combinations comprising specific inhibitors of downstream targets, and efficacy in tumors bearing other mechanisms of BRAF- and/or MEK-inhibitor resistance or other tumor types.

Alternative combination strategies, such as the one we tested, warrant preclinical and clinical investigation as potential approaches to treat patients refractory to BRAF and MEK inhibitors.    

The opportunity exhibited by this approach is significant. However it raises several questions.

1. Is there a “natural” and predictable progression of melanoma mutations which can then be therapeutically addressed? Namely, can one anticipate future changes and perhaps deal with them early?

2. How does one know what the full complements of changes are in a single patient? We can extract part of a localized tumor and from that sample and determine but what of the cells that lodged in the brain for example. We know that cells which cross the blood brain barrier exhibit differing surface markers and these may very well be reflective of further mutations. One may then seek to target these as well, which is a significant challenge.

3. Back to the old stem cell problem, namely if there are stem cells in melanoma then do we target them and if so how do we identify them? Are the cells we target merely subservient to the stem cell which avoids being targeted?

4. Does this approach mandate a therapeutic strategy which is truly patient specific? Namely do we now genetically deal with each patient separately or are their reasonably large classes?

There are substantial issues but the results in this paper a quite significant and promising.

References 

Villaneuva, J., et al, Concurrent MEK2 Mutation and BRAF Amplification Confer Resistance to BRAF and MEK Inhibitors in Melanoma, Cell Reports 4, 1–10, September 26, 2013.